STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP76896.1PFAM: Alkaline phosphatase; KEGG: she:Shewmr4_3312 twin-arginine translocation pathway signal. (587 aa)    
Predicted Functional Partners:
ABP76875.1
PFAM: Alkaline phosphatase; KEGG: shm:Shewmr7_3334 alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
 
 0.982
folE
PFAM: GTP cyclohydrolase I; KEGG: son:SO4254 GTP cyclohydrolase I.
    
 0.933
ABP74838.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.918
ABP76108.1
PFAM: dihydroneopterin aldolase; KEGG: shm:Shewmr7_1549 dihydroneopterin aldolase.
     
 0.918
ABP75748.1
PFAM: protein of unknown function DUF839; KEGG: shm:Shewmr7_2034 twin-arginine translocation pathway signal.
 
  
 0.729
ABP75347.1
Endonuclease/exonuclease/phosphatase; PFAM: PKD domain containing protein; Endonuclease/exonuclease/phosphatase; KEGG: son:SO1844 extracellular nuclease, putative.
  
 0.649
ABP76893.1
KEGG: sdn:Sden_0953 hypothetical protein.
 
     0.465
ABP74107.1
PFAM: Glutathione S-transferase, N-terminal domain; KEGG: vvu:VV20508 glutathione S-transferase.
  
     0.460
ABP76722.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: she:Shewmr4_3033 endonuclease/exonuclease/phosphatase.
  
 0.455
ABP74106.1
KEGG: sdn:Sden_1385 glutathione S-transferase-like protein.
  
     0.447
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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