STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plut_0534Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (378 aa)    
Predicted Functional Partners:
Plut_1035
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 
 0.790
Plut_0858
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 
 0.789
Plut_0860
Polar amino acid transport system substrate-binding protein; TC 3.A.1.3.-; TC 3.A.1.3.-.
 
 
 0.781
Plut_1037
TC 3.A.1.3.-; TC 3.A.1.3.-.
 
 
 0.781
Plut_0861
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 
 0.768
Plut_1038
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 
 0.768
Plut_0859
Polar amino acid transport system substrate-binding protein; TC 3.A.1.3.-; TC 3.A.1.3.-.
 
 
 0.761
Plut_1036
Polar amino acid transport system substrate-binding protein; TC 3.A.1.3.-; TC 3.A.1.3.-.
 
 
 0.761
Plut_0305
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.469
Plut_1394
GAF sensor signal transduction histidine kinase.
   
 
 0.437
Your Current Organism:
Pelodictyon luteolum
NCBI taxonomy Id: 319225
Other names: Chlorobium luteolum DSM 273, Chlorobium luteolum str. DSM 273, Chlorobium luteolum strain DSM 273, P. luteolum DSM 273, Pelodictyon luteolum DSM 273
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