STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plut_0800Pilus assembly protein CpaB. (266 aa)    
Predicted Functional Partners:
Plut_0796
Flp pilus assembly protein ATPase CpaE-like protein.
 
  
 0.979
Plut_0799
Type II secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.977
Plut_0794
TadB protein.
 
  
 0.975
Plut_0793
TadC protein.
 
  
 0.971
Plut_0798
Conserved hypothetical protein.
 
  
 0.967
Plut_0795
Type II secretion system protein.
 
  
 0.964
Plut_0797
Putative membrane protein.
 
     0.944
Plut_0654
TadB protein.
 
  
 0.906
Plut_0656
Flp pilus assembly protein ATPase CpaE-like protein.
 
  
 0.905
Plut_0653
TadC protein.
 
  
 0.903
Your Current Organism:
Pelodictyon luteolum
NCBI taxonomy Id: 319225
Other names: Chlorobium luteolum DSM 273, Chlorobium luteolum str. DSM 273, Chlorobium luteolum strain DSM 273, P. luteolum DSM 273, Pelodictyon luteolum DSM 273
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