Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
Plut_0807Hydrophobe/amphiphile efflux-1 HAE1; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1070 aa)    
Predicted Functional Partners:
Plut_0806
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.995
Plut_0808
RND efflux system, outer membrane lipoprotein, NodT.
 0.994
Plut_1999
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 
0.911
Plut_0733
Outer membrane efflux protein, putative.
 
 0.906
Plut_0057
Outer membrane protein, putative.
 
 0.886
Plut_2001
LipD protein, putative.
 
 0.869
Plut_1333
Outer membrane efflux protein, putative.
 
 0.865
Plut_0494
FusA/NodT family protein.
  
 0.847
Plut_0710
Outer membrane protein-like protein.
  
 0.847
Plut_0872
Outer membrane protein-like protein.
  
 0.847
Your Current Organism:
Pelodictyon luteolum
NCBI taxonomy Id: 319225
Other names: Chlorobium luteolum DSM 273, Chlorobium luteolum str. DSM 273, Chlorobium luteolum strain DSM 273, P. luteolum DSM 273, Pelodictyon luteolum DSM 273
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