Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Plut_0305 | Plut_0633 | PAS/PAC sensor hybrid histidine kinase. | Multi-sensor signal transduction histidine kinase. | 0.712 |
Plut_0305 | Plut_0891 | PAS/PAC sensor hybrid histidine kinase. | Response regulator receiver domain protein (CheY-like). | 0.833 |
Plut_0305 | Plut_0892 | PAS/PAC sensor hybrid histidine kinase. | Multi-sensor signal transduction histidine kinase. | 0.995 |
Plut_0305 | Plut_0943 | PAS/PAC sensor hybrid histidine kinase. | Two component transcriptional regulator, winged helix family. | 0.943 |
Plut_0305 | Plut_1024 | PAS/PAC sensor hybrid histidine kinase. | Periplasmic sensor signal transduction histidine kinase. | 0.819 |
Plut_0305 | Plut_1025 | PAS/PAC sensor hybrid histidine kinase. | Two component transcriptional regulator, winged helix family. | 0.947 |
Plut_0305 | Plut_1093 | PAS/PAC sensor hybrid histidine kinase. | Multi-sensor signal transduction histidine kinase. | 0.995 |
Plut_0305 | Plut_1213 | PAS/PAC sensor hybrid histidine kinase. | Periplasmic sensor signal transduction histidine kinase. | 0.928 |
Plut_0305 | Plut_1358 | PAS/PAC sensor hybrid histidine kinase. | PAS/PAC sensor signal transduction histidine kinase. | 0.996 |
Plut_0305 | Plut_1393 | PAS/PAC sensor hybrid histidine kinase. | Histidine kinase. | 0.719 |
Plut_0633 | Plut_0305 | Multi-sensor signal transduction histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.712 |
Plut_0633 | Plut_0891 | Multi-sensor signal transduction histidine kinase. | Response regulator receiver domain protein (CheY-like). | 0.775 |
Plut_0633 | Plut_0892 | Multi-sensor signal transduction histidine kinase. | Multi-sensor signal transduction histidine kinase. | 0.701 |
Plut_0633 | Plut_0943 | Multi-sensor signal transduction histidine kinase. | Two component transcriptional regulator, winged helix family. | 0.742 |
Plut_0633 | Plut_1024 | Multi-sensor signal transduction histidine kinase. | Periplasmic sensor signal transduction histidine kinase. | 0.400 |
Plut_0633 | Plut_1025 | Multi-sensor signal transduction histidine kinase. | Two component transcriptional regulator, winged helix family. | 0.695 |
Plut_0633 | Plut_1093 | Multi-sensor signal transduction histidine kinase. | Multi-sensor signal transduction histidine kinase. | 0.662 |
Plut_0633 | Plut_1358 | Multi-sensor signal transduction histidine kinase. | PAS/PAC sensor signal transduction histidine kinase. | 0.707 |
Plut_0633 | Plut_1393 | Multi-sensor signal transduction histidine kinase. | Histidine kinase. | 0.927 |
Plut_0891 | Plut_0305 | Response regulator receiver domain protein (CheY-like). | PAS/PAC sensor hybrid histidine kinase. | 0.833 |
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