STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plut_1007Nucleoside-binding protein. (365 aa)    
Predicted Functional Partners:
Plut_0922
Nucleoside ABC transporter ATP-binding protein.
 
 
 0.989
Plut_1660
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.976
Plut_0921
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.973
Plut_1008
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
       0.625
Plut_1006
Conserved hypothetical protein.
       0.519
Plut_1005
ATPase, ParA family.
       0.503
Plut_1009
Cyclic nucleotide-binding domain (cNMP-BD) protein.
       0.478
Plut_1010
DNA polymerase III, epsilon subunit.
       0.477
Plut_1004
Extracellular solute-binding protein, family 3.
       0.464
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.428
Your Current Organism:
Pelodictyon luteolum
NCBI taxonomy Id: 319225
Other names: Chlorobium luteolum DSM 273, Chlorobium luteolum str. DSM 273, Chlorobium luteolum strain DSM 273, P. luteolum DSM 273, Pelodictyon luteolum DSM 273
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