STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plut_1237Pentapeptide repeat family protein. (438 aa)    
Predicted Functional Partners:
Plut_1238
Conserved hypothetical protein.
       0.781
Plut_1239
Hypothetical protein.
       0.781
Plut_1240
Transcriptional regulator, putative.
       0.682
Plut_1236
Glycosyl transferase.
  
    0.565
Plut_1235
Oxidoreductase, FAD-binding protein.
       0.447
Plut_0243
WD-40 repeat-containing protein.
 
     0.442
Plut_0484
TPR repeat.
 
    0.422
Plut_1241
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
       0.412
Your Current Organism:
Pelodictyon luteolum
NCBI taxonomy Id: 319225
Other names: Chlorobium luteolum DSM 273, Chlorobium luteolum str. DSM 273, Chlorobium luteolum strain DSM 273, P. luteolum DSM 273, Pelodictyon luteolum DSM 273
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