Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Plut_0979 | vapC | Plut_0979 | Plut_1876 | Hypothetical protein. | Plasmid stabilization protein StbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.489 |
Plut_1076 | vapC | Plut_1076 | Plut_1876 | Conserved hypothetical protein. | Plasmid stabilization protein StbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.814 |
Plut_1877 | Plut_1878 | Plut_1877 | Plut_1878 | Conserved hypothetical protein. | Putative transcriptional regulator. | 0.476 |
Plut_1877 | vapC | Plut_1877 | Plut_1876 | Conserved hypothetical protein. | Plasmid stabilization protein StbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.989 |
Plut_1878 | Plut_1877 | Plut_1878 | Plut_1877 | Putative transcriptional regulator. | Conserved hypothetical protein. | 0.476 |
Plut_1878 | vapC | Plut_1878 | Plut_1876 | Putative transcriptional regulator. | Plasmid stabilization protein StbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.476 |
vapC | Plut_0979 | Plut_1876 | Plut_0979 | Plasmid stabilization protein StbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.489 |
vapC | Plut_1076 | Plut_1876 | Plut_1076 | Plasmid stabilization protein StbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Conserved hypothetical protein. | 0.814 |
vapC | Plut_1877 | Plut_1876 | Plut_1877 | Plasmid stabilization protein StbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Conserved hypothetical protein. | 0.989 |
vapC | Plut_1878 | Plut_1876 | Plut_1878 | Plasmid stabilization protein StbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Putative transcriptional regulator. | 0.476 |