STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plut_2000Conserved hypothetical protein. (137 aa)    
Predicted Functional Partners:
Plut_1999
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.909
macB
ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.884
Plut_2001
LipD protein, putative.
 
   0.802
Plut_2002
Conserved hypothetical protein.
  
    0.732
Plut_1997
Hydroxyacylglutathione hydrolase, putative; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
     
 0.723
Plut_1998
Conserved hypothetical protein.
       0.721
Plut_1540
TonB-dependent receptor, putative.
  
   
 0.619
Plut_0291
Protoporphyrinogen oxidase, putative.
  
     0.576
Plut_1481
Transporter, putative.
  
   
 0.560
Plut_0118
Conserved hypothetical protein.
  
     0.544
Your Current Organism:
Pelodictyon luteolum
NCBI taxonomy Id: 319225
Other names: Chlorobium luteolum DSM 273, Chlorobium luteolum str. DSM 273, Chlorobium luteolum strain DSM 273, P. luteolum DSM 273, Pelodictyon luteolum DSM 273
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.