STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plut_2000Conserved hypothetical protein. (137 aa)    
Predicted Functional Partners:
Plut_1999
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.907
Plut_2001
LipD protein, putative.
 
  0.898
macB
ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.847
Plut_2002
Conserved hypothetical protein.
  
    0.744
Plut_1997
Hydroxyacylglutathione hydrolase, putative; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
       0.725
Plut_1998
Conserved hypothetical protein.
       0.725
Plut_0494
FusA/NodT family protein.
  
  0.704
Plut_0057
Outer membrane protein, putative.
  
  0.696
Plut_1333
Outer membrane efflux protein, putative.
  
  0.693
Plut_0368
Outer membrane protein-like protein.
   
  0.652
Your Current Organism:
Pelodictyon luteolum
NCBI taxonomy Id: 319225
Other names: Chlorobium luteolum DSM 273, Chlorobium luteolum str. DSM 273, Chlorobium luteolum strain DSM 273, P. luteolum DSM 273, Pelodictyon luteolum DSM 273
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