STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Plut_2002Conserved hypothetical protein. (77 aa)    
Predicted Functional Partners:
Plut_2001
LipD protein, putative.
       0.785
Plut_2000
Conserved hypothetical protein.
  
    0.744
Plut_1997
Hydroxyacylglutathione hydrolase, putative; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
 
   
 0.675
Plut_1999
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.658
Plut_1998
Conserved hypothetical protein.
       0.606
Plut_2003
Conserved hypothetical protein.
       0.519
Plut_1230
Copper-translocating P-type ATPase.
  
  
 0.403
Your Current Organism:
Pelodictyon luteolum
NCBI taxonomy Id: 319225
Other names: Chlorobium luteolum DSM 273, Chlorobium luteolum str. DSM 273, Chlorobium luteolum strain DSM 273, P. luteolum DSM 273, Pelodictyon luteolum DSM 273
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.