Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Plut_0311 | Plut_0353 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.694 |
Plut_0311 | Plut_1228 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.714 |
Plut_0311 | Plut_1240 | Conserved hypothetical protein. | Transcriptional regulator, putative. | 0.685 |
Plut_0311 | Plut_1486 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.754 |
Plut_0311 | Plut_1902 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.727 |
Plut_0311 | Plut_1975 | Conserved hypothetical protein. | Photosystem P840 reaction center iron-sulfur protein. | 0.737 |
Plut_0311 | Plut_2042 | Conserved hypothetical protein. | Twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.512 |
Plut_0311 | Plut_2044 | Conserved hypothetical protein. | Polysulfide reductase, subunit C, putative. | 0.618 |
Plut_0311 | Plut_2045 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.560 |
Plut_0353 | Plut_0311 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.694 |
Plut_0353 | Plut_1228 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.754 |
Plut_0353 | Plut_1240 | Conserved hypothetical protein. | Transcriptional regulator, putative. | 0.754 |
Plut_0353 | Plut_1486 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.765 |
Plut_0353 | Plut_1902 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.766 |
Plut_0353 | Plut_1975 | Conserved hypothetical protein. | Photosystem P840 reaction center iron-sulfur protein. | 0.764 |
Plut_0353 | Plut_2042 | Conserved hypothetical protein. | Twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.402 |
Plut_0353 | Plut_2044 | Conserved hypothetical protein. | Polysulfide reductase, subunit C, putative. | 0.626 |
Plut_0353 | Plut_2045 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.451 |
Plut_1228 | Plut_0311 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.714 |
Plut_1228 | Plut_0353 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.754 |
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