STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARN70717.1Gliding motility-associated ABC transporter permease subunit GldF; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
ARN70718.1
Gliding motility-associated ABC transporter substrate-binding protein GldG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
ARN71930.1
Gliding motility-associated ABC transporter ATP-binding subunit GldA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.926
ARN70715.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.819
ARN70716.1
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
ARN72110.1
Gliding motility lipoprotein GldD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.664
ARN71884.1
Gliding motility lipoprotein GldJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.647
ARN70577.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.646
ARN72511.1
Gliding motility lipoprotein GldB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.607
ARN70714.1
PhoH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.585
ARN70755.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.533
Your Current Organism:
Nonlabens sediminis
NCBI taxonomy Id: 319236
Other names: Flavobacteriaceae bacterium JCM 19294, LMG 23247, LMG:23247, N. sediminis, NBRC 100970, Nonlabens sediminis (Khan et al. 2006) Yi and Chun 2012, Sandarakinotalea sediminis, Sandarakinotalea sediminis Khan et al. 2006, strain CKA-5
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