Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARN70430.1 | ARN71199.1 | BST91_01545 | BST91_05830 | Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.753 |
| ARN70430.1 | ARN71924.1 | BST91_01545 | BST91_09810 | Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.404 |
| ARN70430.1 | ARN71928.1 | BST91_01545 | BST91_09830 | Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| ARN70430.1 | aroC | BST91_01545 | BST91_04970 | Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.926 |
| ARN70430.1 | aroE | BST91_01545 | BST91_05355 | Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. | AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.759 |
| ARN70430.1 | aroK | BST91_01545 | BST91_06540 | Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.506 |
| ARN71199.1 | ARN70430.1 | BST91_05830 | BST91_01545 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.753 |
| ARN71199.1 | ARN71924.1 | BST91_05830 | BST91_09810 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.984 |
| ARN71199.1 | ARN71928.1 | BST91_05830 | BST91_09830 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.968 |
| ARN71199.1 | ARN72604.1 | BST91_05830 | BST91_09835 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.716 |
| ARN71199.1 | aroC | BST91_05830 | BST91_04970 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.967 |
| ARN71199.1 | aroE | BST91_05830 | BST91_05355 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.956 |
| ARN71199.1 | aroK | BST91_05830 | BST91_06540 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.931 |
| ARN71199.1 | aroQ | BST91_05830 | BST91_08525 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type II 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.980 |
| ARN71199.1 | gyrA | BST91_05830 | BST91_06345 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.787 |
| ARN71199.1 | mnmG | BST91_05830 | BST91_11240 | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.666 |
| ARN71924.1 | ARN70430.1 | BST91_09810 | BST91_01545 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.404 |
| ARN71924.1 | ARN71199.1 | BST91_09810 | BST91_05830 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| ARN71924.1 | ARN71928.1 | BST91_09810 | BST91_09830 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.988 |
| ARN71924.1 | ARN72604.1 | BST91_09810 | BST91_09835 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
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