Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANN18000.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)    
Predicted Functional Partners:
menC-2
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
     0.984
ANN18001.1
Glutamate carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.959
ANN17998.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
ANN17990.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.872
ANN18002.1
D-glutamate deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
ANN21893.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.797
ANN17194.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.763
ANN17994.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.740
ANN17996.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.728
ANN17197.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.658
Your Current Organism:
Amycolatopsis orientalis
NCBI taxonomy Id: 31958
Other names: A. orientalis, ATCC 19795, Actinoplanes sp. ATCC 53771, Amycolatopsis orientalis orientalis, Amycolatopsis orientalis subsp. orientalis, CIP 107113, DSM 40040, IFO 12806, IMSNU 20058, ISP 5040, JCM 4235, JCM 4600, KCTC 9412, NBRC 12806, NRRL 2450, Nocardia orientalis, Streptomyces orientalis, UNIQEM 181, VKM Ac-866
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