Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gctPutative glycerol-3-phosphate cytidyltransferase. (165 aa)    
Predicted Functional Partners:
gpsA
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.906
CMS0709
Putative glycerol phosphate dehydrogenase.
     
 0.902
CMS0082
Putative glycosyl transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.827
CMS0081
Putative glycosyl transferase.
 
    0.698
CMS0078
Putative sortase-sorted surface protein.
 
     0.687
CMS0079
Putative sortase-sorted surface protein.
 
     0.654
CMS2798
Putative exported protein.
 
     0.646
CMS0083
Putative glycosyl transferase.
 
    0.636
CMS2391
Putative dual-domain glycosyl transferase.
 
     0.432
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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