Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CMS0019 | CMS0178 | CMS0019 | CMS0178 | Putative secreted penicillin-binding protein. | Putative penicillin-binding protein/transpeptidase. | 0.795 |
CMS0019 | CMS1367 | CMS0019 | CMS1367 | Putative secreted penicillin-binding protein. | Penicillin binding protein. | 0.942 |
CMS0019 | CMS1380 | CMS0019 | CMS1380 | Putative secreted penicillin-binding protein. | Putative cell division protein. | 0.646 |
CMS0019 | ftsW | CMS0019 | CMS1372 | Putative secreted penicillin-binding protein. | Putative cell division protein FtsW; Belongs to the SEDS family. | 0.975 |
CMS0019 | mraY | CMS0019 | CMS1370 | Putative secreted penicillin-binding protein. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.688 |
CMS0019 | murC | CMS0019 | CMS1374 | Putative secreted penicillin-binding protein. | UDP-N-acetylmuramoyl-L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.704 |
CMS0019 | murF | CMS0019 | CMS1369 | Putative secreted penicillin-binding protein. | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.646 |
CMS0177 | CMS0178 | CMS0177 | CMS0178 | Putative secreted phosphoesterase protein. | Putative penicillin-binding protein/transpeptidase. | 0.817 |
CMS0177 | CMS0179 | CMS0177 | CMS0179 | Putative secreted phosphoesterase protein. | Conserved hypothetical protein. | 0.720 |
CMS0178 | CMS0019 | CMS0178 | CMS0019 | Putative penicillin-binding protein/transpeptidase. | Putative secreted penicillin-binding protein. | 0.795 |
CMS0178 | CMS0177 | CMS0178 | CMS0177 | Putative penicillin-binding protein/transpeptidase. | Putative secreted phosphoesterase protein. | 0.817 |
CMS0178 | CMS0179 | CMS0178 | CMS0179 | Putative penicillin-binding protein/transpeptidase. | Conserved hypothetical protein. | 0.661 |
CMS0178 | CMS1367 | CMS0178 | CMS1367 | Putative penicillin-binding protein/transpeptidase. | Penicillin binding protein. | 0.775 |
CMS0178 | CMS1380 | CMS0178 | CMS1380 | Putative penicillin-binding protein/transpeptidase. | Putative cell division protein. | 0.983 |
CMS0178 | ftsW | CMS0178 | CMS1372 | Putative penicillin-binding protein/transpeptidase. | Putative cell division protein FtsW; Belongs to the SEDS family. | 0.655 |
CMS0178 | mltG | CMS0178 | CMS0731 | Putative penicillin-binding protein/transpeptidase. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.757 |
CMS0178 | mraY | CMS0178 | CMS1370 | Putative penicillin-binding protein/transpeptidase. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.715 |
CMS0178 | murC | CMS0178 | CMS1374 | Putative penicillin-binding protein/transpeptidase. | UDP-N-acetylmuramoyl-L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.742 |
CMS0178 | murF | CMS0178 | CMS1369 | Putative penicillin-binding protein/transpeptidase. | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.766 |
CMS0179 | CMS0177 | CMS0179 | CMS0177 | Conserved hypothetical protein. | Putative secreted phosphoesterase protein. | 0.720 |
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