STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMS0273Putative integral membrane transport protein. (221 aa)    
Predicted Functional Partners:
CMS0274
Putative ATP-binding ABC transport protein.
 0.999
CMS0272
Putative extracellular solute-binding transport protein; Belongs to the bacterial solute-binding protein 3 family.
 0.998
CMS1225
Putative glutamate/aspartate uptake system ATP-binding protein.
 
 0.990
CMS2484
Putative ABC transporter ATP-binding protein.
 
 
  
 0.882
CMS1201
Putative secreted protein (pseudogene); F.
 
 
  
 0.877
metN
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
 0.873
CMS0476
Putative ABC transport ATP-binding protein.
 
 
  
 0.861
CMS1776
Putative ABC transporter ATP-binding subunit.
 
      0.816
CMS2522
Putative ABC transporter ATP-binding subunit.
    
 0.803
CMS1226
Putative glutamate/aspartate-binding transport protein.
 
 
 0.774
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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