Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CMS0318 | CMS0620 | CMS0318 | CMS0620 | Putative N-acetyltransferase. | Putative integral membrane protein. | 0.624 |
| CMS0318 | rplM | CMS0318 | CMS0320 | Putative N-acetyltransferase. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.491 |
| CMS0318 | rplQ | CMS0318 | CMS0317 | Putative N-acetyltransferase. | 50S ribosomal protein L17. | 0.503 |
| CMS0318 | rpoA | CMS0318 | CMS0316 | Putative N-acetyltransferase. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.407 |
| CMS0318 | rpsI | CMS0318 | CMS0321 | Putative N-acetyltransferase. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.401 |
| CMS0318 | truA | CMS0318 | CMS0319 | Putative N-acetyltransferase. | Putative pseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.675 |
| CMS0620 | CMS0318 | CMS0620 | CMS0318 | Putative integral membrane protein. | Putative N-acetyltransferase. | 0.624 |
| rplM | CMS0318 | CMS0320 | CMS0318 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Putative N-acetyltransferase. | 0.491 |
| rplM | rplQ | CMS0320 | CMS0317 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L17. | 0.999 |
| rplM | rpoA | CMS0320 | CMS0316 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.965 |
| rplM | rpsI | CMS0320 | CMS0321 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | truA | CMS0320 | CMS0319 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Putative pseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.733 |
| rplQ | CMS0318 | CMS0317 | CMS0318 | 50S ribosomal protein L17. | Putative N-acetyltransferase. | 0.503 |
| rplQ | rplM | CMS0317 | CMS0320 | 50S ribosomal protein L17. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| rplQ | rpoA | CMS0317 | CMS0316 | 50S ribosomal protein L17. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.980 |
| rplQ | rpsI | CMS0317 | CMS0321 | 50S ribosomal protein L17. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplQ | truA | CMS0317 | CMS0319 | 50S ribosomal protein L17. | Putative pseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.989 |
| rpoA | CMS0318 | CMS0316 | CMS0318 | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Putative N-acetyltransferase. | 0.407 |
| rpoA | rplM | CMS0316 | CMS0320 | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.965 |
| rpoA | rplQ | CMS0316 | CMS0317 | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 50S ribosomal protein L17. | 0.980 |
page 1 of 2