Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CMS0601 | CMS0602 | CMS0601 | CMS0602 | Putative insertion element IS1121 transposase; N/R. | Putative phosphotransferase enzyme IIA component. | 0.514 |
CMS0601 | CMS0603 | CMS0601 | CMS0603 | Putative insertion element IS1121 transposase; N/R. | Putative phosphotransferase IIB component. | 0.514 |
CMS0602 | CMS0601 | CMS0602 | CMS0601 | Putative phosphotransferase enzyme IIA component. | Putative insertion element IS1121 transposase; N/R. | 0.514 |
CMS0602 | CMS0603 | CMS0602 | CMS0603 | Putative phosphotransferase enzyme IIA component. | Putative phosphotransferase IIB component. | 0.996 |
CMS0602 | fruA | CMS0602 | CMS1801 | Putative phosphotransferase enzyme IIA component. | PTS system fructose-specific EIIBC component. | 0.655 |
CMS0602 | licR | CMS0602 | CMS0305 | Putative phosphotransferase enzyme IIA component. | Putative PTS system antitermination regulator. | 0.522 |
CMS0602 | ptsH | CMS0602 | CMS0307 | Putative phosphotransferase enzyme IIA component. | Putative phosphocarrier protein HPr component (histidine-containing protein). | 0.908 |
CMS0602 | ptsH-2 | CMS0602 | CMS1800 | Putative phosphotransferase enzyme IIA component. | Phosphocarrier protein Hpr. | 0.908 |
CMS0603 | CMS0601 | CMS0603 | CMS0601 | Putative phosphotransferase IIB component. | Putative insertion element IS1121 transposase; N/R. | 0.514 |
CMS0603 | CMS0602 | CMS0603 | CMS0602 | Putative phosphotransferase IIB component. | Putative phosphotransferase enzyme IIA component. | 0.996 |
CMS0603 | CMS0642A | CMS0603 | CMS0642A | Putative phosphotransferase IIB component. | Putative exopolysaccharide production protein; Tandem duplication suggested by similarity to upstream CDS. | 0.596 |
CMS0603 | CMS2743 | CMS0603 | CMS2743 | Putative phosphotransferase IIB component. | Putative lipoprotein. | 0.411 |
CMS0603 | fruA | CMS0603 | CMS1801 | Putative phosphotransferase IIB component. | PTS system fructose-specific EIIBC component. | 0.790 |
CMS0603 | licR | CMS0603 | CMS0305 | Putative phosphotransferase IIB component. | Putative PTS system antitermination regulator. | 0.672 |
CMS0603 | ptsH | CMS0603 | CMS0307 | Putative phosphotransferase IIB component. | Putative phosphocarrier protein HPr component (histidine-containing protein). | 0.903 |
CMS0603 | ptsH-2 | CMS0603 | CMS1800 | Putative phosphotransferase IIB component. | Phosphocarrier protein Hpr. | 0.903 |
CMS0642A | CMS0603 | CMS0642A | CMS0603 | Putative exopolysaccharide production protein; Tandem duplication suggested by similarity to upstream CDS. | Putative phosphotransferase IIB component. | 0.596 |
CMS0642A | CMS2743 | CMS0642A | CMS2743 | Putative exopolysaccharide production protein; Tandem duplication suggested by similarity to upstream CDS. | Putative lipoprotein. | 0.491 |
CMS2743 | CMS0603 | CMS2743 | CMS0603 | Putative lipoprotein. | Putative phosphotransferase IIB component. | 0.411 |
CMS2743 | CMS0642A | CMS2743 | CMS0642A | Putative lipoprotein. | Putative exopolysaccharide production protein; Tandem duplication suggested by similarity to upstream CDS. | 0.491 |
page 1 of 2