STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
CMS0702Putative glycerol kinase (pseudogene); PS00933 FGGY family of carbohydrate kinases signature 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (268 aa)    
Predicted Functional Partners:
CMS0709
Putative glycerol phosphate dehydrogenase.
  
 0.880
CMS0705
Putative PTS system enzyme.
 
  
 0.682
ndk
Nucleoside diphosphate kinase.
  
 
 0.663
cypB
Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.574
dak2
Putative dihydroxyacetone kinase subunit.
  
  
 0.562
CMS0703
Putative dihydroxyacetone kinase subunit.
  
  
 0.541
fruA
PTS system fructose-specific EIIBC component.
   
  
 0.520
CMS0941
Putative aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
   
0.500
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.474
CMS0418
Conserved hypothetical protein.
    
 
 0.459
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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