STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMS0709Putative glycerol phosphate dehydrogenase. (586 aa)    
Predicted Functional Partners:
gpsA
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.928
gct
Putative glycerol-3-phosphate cytidyltransferase.
     
 0.902
CMS0705
Putative PTS system enzyme.
    
 0.883
CMS0702
Putative glycerol kinase (pseudogene); PS00933 FGGY family of carbohydrate kinases signature 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 0.872
CMS0703
Putative dihydroxyacetone kinase subunit.
    
 0.822
dak2
Putative dihydroxyacetone kinase subunit.
    
 0.822
CMS2383
Putative glycerone kinase.
    
 0.822
CMS1356
Putative phospholipid/glycerol acyltransferase.
  
 
 0.820
CMS0710
Putative DeoR-family transcriptional regulator.
 
   
 0.702
CMS0941
Putative aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.653
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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