Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CMS0648 | CMS0821 | CMS0648 | CMS0821 | Putative secreted protein. | Putative sortase-sorted surface protein. | 0.401 |
CMS0820 | CMS0821 | CMS0820 | CMS0821 | Putative two component system response regulator. | Putative sortase-sorted surface protein. | 0.443 |
CMS0821 | CMS0648 | CMS0821 | CMS0648 | Putative sortase-sorted surface protein. | Putative secreted protein. | 0.401 |
CMS0821 | CMS0820 | CMS0821 | CMS0820 | Putative sortase-sorted surface protein. | Putative two component system response regulator. | 0.443 |
CMS0821 | CMS0822 | CMS0821 | CMS0822 | Putative sortase-sorted surface protein. | Putative oxidoreductase. | 0.458 |
CMS0821 | CMS2658 | CMS0821 | CMS2658 | Putative sortase-sorted surface protein. | Putative glycosyl transferase. | 0.402 |
CMS0821 | CMS2945 | CMS0821 | CMS2945 | Putative sortase-sorted surface protein. | Conserved hypothetical protein. | 0.869 |
CMS0821 | rpsD | CMS0821 | CMS0727 | Putative sortase-sorted surface protein. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.415 |
CMS0821 | rpsF | CMS0821 | CMS3099 | Putative sortase-sorted surface protein. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.456 |
CMS0821 | secA | CMS0821 | CMS0673 | Putative sortase-sorted surface protein. | Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.452 |
CMS0822 | CMS0821 | CMS0822 | CMS0821 | Putative oxidoreductase. | Putative sortase-sorted surface protein. | 0.458 |
CMS2658 | CMS0821 | CMS2658 | CMS0821 | Putative glycosyl transferase. | Putative sortase-sorted surface protein. | 0.402 |
CMS2945 | CMS0821 | CMS2945 | CMS0821 | Conserved hypothetical protein. | Putative sortase-sorted surface protein. | 0.869 |
rpsD | CMS0821 | CMS0727 | CMS0821 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | Putative sortase-sorted surface protein. | 0.415 |
rpsD | rpsF | CMS0727 | CMS3099 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rpsF | CMS0821 | CMS3099 | CMS0821 | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Putative sortase-sorted surface protein. | 0.456 |
rpsF | rpsD | CMS3099 | CMS0727 | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
secA | CMS0821 | CMS0673 | CMS0821 | Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | Putative sortase-sorted surface protein. | 0.452 |