Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CMS0991Putative ABC transporter, ATP-binding subunit. (311 aa)    
Predicted Functional Partners:
CMS0992
Putative integral membrane ABC transport protein.
  
 0.980
CMS1776
Putative ABC transporter ATP-binding subunit.
 
    
0.891
CMS0529
Putative branched chain amino acid transport ATP-binding protein.
 
    
0.818
CMS0993
Putative two-component system sensor kinase.
 
     0.807
CMS0994
Putative two-component system response regulator.
       0.773
CMS0990
Putative integral membrane protein.
       0.554
CMS2589
Putative ABC transporter ATP-binding protein.
  
  0.492
CMS2522
Putative ABC transporter ATP-binding subunit.
 
    
0.455
CMS2559
Putative ABC transporter ATP-binding protein.
  
     0.443
CMS0273
Putative integral membrane transport protein.
 
      0.425
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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