Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CMS1113Putative integral membrane transport protein. (322 aa)    
Predicted Functional Partners:
CMS1114
Putative integral membrane transport protein.
 
   0.964
CMS1693
Putative integral membrane transport protein.
 
   0.848
CMS2574
Putative solute-binding transport lipoprotein (pseudogene); Signal peptide predicted for CMS2572 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.755 between residues 28 and 29.
 
   0.848
CMS2672
Putative integral membrane transport protein.
 
   0.846
CMS1692
Putative substrate-binding transport.
  
   0.843
CMS2674
Putative substrate-binding transport lipoprotein.
 
   0.818
CMS0921
Putative integral membrane transport protein.
 
   0.745
CMS0052
Putative integral membrane binding-protein-dependent transport protein.
 
 
 0.734
CMS2352
Putative inregral membrane transport.
 
 
 0.732
CMS1014
Putative integral membrane transport protein.
  
   0.714
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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