hflX protein (Clavibacter michiganensis sepedonicus)

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hflX

Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (521 aa)

Predicted Functional Partners:

rplK

0.991

rplU

0.972

rpmF

0.970

rplS

0.969

rplQ

0.968

rplT

0.968

rpmA

0.968

rpmG

0.968

rplD

0.960

rplX

0.960

Your Current Organism:

Clavibacter michiganensis sepedonicus

NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hflX	rplD	CMS1214	CMS0284	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.960
hflX	rplK	CMS1214	CMS2624	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.991
hflX	rplQ	CMS1214	CMS0317	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L17.	0.968
hflX	rplS	CMS1214	CMS0761	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.969
hflX	rplT	CMS1214	CMS1223	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.968
hflX	rplU	CMS1214	CMS1816	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.972
hflX	rplX	CMS1214	CMS0294	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.960
hflX	rpmA	CMS1214	CMS1815	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.968
hflX	rpmF	CMS1214	CMS0745	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50s ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.970
hflX	rpmG	CMS1214	CMS3071	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.968
rplD	hflX	CMS0284	CMS1214	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	0.960
rplD	rplK	CMS0284	CMS2624	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.999
rplD	rplQ	CMS0284	CMS0317	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L17.	0.999
rplD	rplS	CMS0284	CMS0761	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.999
rplD	rplT	CMS0284	CMS1223	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplD	rplU	CMS0284	CMS1816	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplD	rplX	CMS0284	CMS0294	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.999
rplD	rpmA	CMS0284	CMS1815	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplD	rpmF	CMS0284	CMS0745	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50s ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.999
rplD	rpmG	CMS0284	CMS3071	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.999

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