STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMS1225Putative glutamate/aspartate uptake system ATP-binding protein. (262 aa)    
Predicted Functional Partners:
CMS1227
Putative glutamate permease.
 0.998
CMS1228
Putative glutamate permease.
 0.996
CMS0273
Putative integral membrane transport protein.
 
 0.991
CMS1226
Putative glutamate/aspartate-binding transport protein.
 
 0.989
CMS1763
Putative ABC transporter ATP-binding subunit.
 
    
0.904
CMS0196
Putative ABC transporter.
 
     
0.900
CMS2880
Putative ABC transporter ATP-binding subunit.
 
 
   
0.900
CMS0272
Putative extracellular solute-binding transport protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.828
CMS2523
Putative integral membrane transport protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     0.646
CMS2215
Putative integral membrane transport protein.
 
    
 0.572
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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