STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMS1408Putative Na(+)/H(+) antiporter subunit. (185 aa)    
Predicted Functional Partners:
mnhA
Putative Na(+)/H(+) antiporter subunit.
 
 0.999
CMS1409
Putative Na(+)/H(+) antiporter subunit.
 
 
 0.998
CMS1410
Putative Na(+)/H(+) antiporter subunit.
 
 
 0.998
CMS1411
Putative Na(+)/H(+) antiporter subunit.
 
 
 0.998
CMS1412
Putative Na(+)/H(+) antiporter subunit.
 
 
 0.996
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
     
 0.580
CMS1405
Putative glycosyl transferase.
     
 0.544
CMS1406
Putative phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
       0.535
CMS2006
Putative glutamate synthase alpha subunit.
      
 0.519
ilvB
Acetolactate synthase.
       0.472
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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