Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CMS0016 | CMS0103 | CMS0016 | CMS0103 | Putative glutamine amidotransferase. | Probable bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.643 |
CMS0016 | CMS1762 | CMS0016 | CMS1762 | Putative glutamine amidotransferase. | Conserved hypothetical protein. | 0.636 |
CMS0016 | trpE | CMS0016 | CMS1761 | Putative glutamine amidotransferase. | Anthranilate synthase component I. | 0.999 |
CMS0075 | CMS1762 | CMS0075 | CMS1762 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.588 |
CMS0075 | CMS2458 | CMS0075 | CMS2458 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.535 |
CMS0075 | CMS2944 | CMS0075 | CMS2944 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.607 |
CMS0103 | CMS0016 | CMS0103 | CMS0016 | Probable bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Putative glutamine amidotransferase. | 0.643 |
CMS0103 | CMS1762 | CMS0103 | CMS1762 | Probable bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Conserved hypothetical protein. | 0.610 |
CMS0103 | trpE | CMS0103 | CMS1761 | Probable bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Anthranilate synthase component I. | 0.743 |
CMS1089 | CMS1762 | CMS1089 | CMS1762 | Pyruvate dehydrogenase; Belongs to the TPP enzyme family. | Conserved hypothetical protein. | 0.469 |
CMS1089 | ilvB | CMS1089 | CMS1414 | Pyruvate dehydrogenase; Belongs to the TPP enzyme family. | Acetolactate synthase. | 0.848 |
CMS1089 | ilvD | CMS1089 | CMS1413 | Pyruvate dehydrogenase; Belongs to the TPP enzyme family. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.656 |
CMS1089 | leuA | CMS1089 | CMS1727 | Pyruvate dehydrogenase; Belongs to the TPP enzyme family. | 2-ispoprylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.877 |
CMS1762 | CMS0016 | CMS1762 | CMS0016 | Conserved hypothetical protein. | Putative glutamine amidotransferase. | 0.636 |
CMS1762 | CMS0075 | CMS1762 | CMS0075 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.588 |
CMS1762 | CMS0103 | CMS1762 | CMS0103 | Conserved hypothetical protein. | Probable bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.610 |
CMS1762 | CMS1089 | CMS1762 | CMS1089 | Conserved hypothetical protein. | Pyruvate dehydrogenase; Belongs to the TPP enzyme family. | 0.469 |
CMS1762 | CMS2458 | CMS1762 | CMS2458 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.479 |
CMS1762 | CMS2944 | CMS1762 | CMS2944 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.483 |
CMS1762 | ilvB | CMS1762 | CMS1414 | Conserved hypothetical protein. | Acetolactate synthase. | 0.469 |
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