Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
treSTrehalose synthase. (577 aa)    
Predicted Functional Partners:
CMS1109
Putative maltokinase.
 0.999
CMS1526
Putative sugar synthase.
 
 
 0.981
CMS1525
Putative sugar synthase.
 
 
 0.979
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.964
glgP
Putative glycogen phosphorylase.
  
 0.960
CMS1042
Putative glycogen debranching enzyme; Similarity to CMS1046 suggest local inverted duplication; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.957
CMS1046
Putative glycogen debranching enzyme; Similarity to CMS1042 suggest local inverted duplication; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.955
CMS1406
Putative phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 
 0.952
CMS2611
Alpha-glucosidase.
 
  
0.930
CMS0438
Putative alpha amylase.
  
  
 
0.921
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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