Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CMS2059Putative two-component system response regulator. (226 aa)    
Predicted Functional Partners:
CMS2060
Putative two-component system sensor kinase.
 
   0.850
CMS0993
Putative two-component system sensor kinase.
  
   0.753
CMS1944
Putative two-component system response regulator.
  
     0.635
CMS2284
Putative two-component system sensor kinase.
  
   0.613
CMS0474
Putative two component sensor kinase.
  
   0.606
CMS2061
Putative integral membrane protein.
       0.594
CMS0473
Putative two component response regulator.
  
     0.569
CMS2283
Putative two component system response regulator.
  
     0.524
CMS0338
Putative two-component system sensor kinase.
 
 
 0.521
CMS1730
Putative two component system response regulator.
  
     0.511
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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