STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMS2081Putative ABC-transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (334 aa)    
Predicted Functional Partners:
CMS2080
Putative integral membrane efflux protein (pseudogene); HMMPfam hit to PF07690, Major Facilitator Superfamily.
 
 
 0.980
CMS2523
Putative integral membrane transport protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.946
CMS0061
Putative ABC transporter ATP-binding subunit; Belongs to the ABC transporter superfamily.
 
    
0.907
CMS0124
Putative integral membrane, nucleotide-binding ABC transporter subunit.
 
   
0.905
CMS0196
Putative ABC transporter.
 
   
0.872
CMS1336
Putative inner membrane transport protein.
 
  
 0.863
CMS1337
Putative inner membrane transport protein.
 
 
 0.844
CMS1763
Putative ABC transporter ATP-binding subunit.
 
    
0.713
CMS1609
Putative ABC transporter ATP-binding subunit.
 
   
0.641
CMS0273
Putative integral membrane transport protein.
 
 
 
  0.559
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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