Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CMS0654 | CMS2098 | CMS0654 | CMS2098 | Putative metal transporter ATPase. | Putative cation efflux protein. | 0.449 |
| CMS1871 | CMS2098 | CMS1871 | CMS2098 | Putative integral membrane protein. | Putative cation efflux protein. | 0.445 |
| CMS2098 | CMS0654 | CMS2098 | CMS0654 | Putative cation efflux protein. | Putative metal transporter ATPase. | 0.449 |
| CMS2098 | CMS1871 | CMS2098 | CMS1871 | Putative cation efflux protein. | Putative integral membrane protein. | 0.445 |
| CMS2098 | CMS2099 | CMS2098 | CMS2099 | Putative cation efflux protein. | Conserved hypothetical protein. | 0.735 |
| CMS2098 | racE | CMS2098 | CMS2101 | Putative cation efflux protein. | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.506 |
| CMS2098 | rph | CMS2098 | CMS2100 | Putative cation efflux protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.497 |
| CMS2099 | CMS2098 | CMS2099 | CMS2098 | Conserved hypothetical protein. | Putative cation efflux protein. | 0.735 |
| CMS2099 | racE | CMS2099 | CMS2101 | Conserved hypothetical protein. | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.962 |
| CMS2099 | rph | CMS2099 | CMS2100 | Conserved hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.980 |
| racE | CMS2098 | CMS2101 | CMS2098 | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | Putative cation efflux protein. | 0.506 |
| racE | CMS2099 | CMS2101 | CMS2099 | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | Conserved hypothetical protein. | 0.962 |
| racE | rph | CMS2101 | CMS2100 | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.837 |
| rph | CMS2098 | CMS2100 | CMS2098 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Putative cation efflux protein. | 0.497 |
| rph | CMS2099 | CMS2100 | CMS2099 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Conserved hypothetical protein. | 0.980 |
| rph | racE | CMS2100 | CMS2101 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.837 |