STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMS2391Putative dual-domain glycosyl transferase. (647 aa)    
Predicted Functional Partners:
kanE
Putative glycosyl transferase.
    0.986
CMS2389
Putative surface polysaccharide transport protein.
 
  
 0.821
CMS0083
Putative glycosyl transferase.
 
    0.813
CMS0081
Putative glycosyl transferase.
  
    0.745
CMS0082
Putative glycosyl transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.680
CMS0080
Putative glycosyl transferase.
 
  
 0.655
CMS1590
Putative initial glycosyl transferase; Responsible for linkage of the initial sugar to the lipid carrier in surface polysaccharide biosynthesis.
  
  
 0.607
CMS0079
Putative sortase-sorted surface protein.
  
     0.585
CMS0628
Putative dTDP-sugar reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.565
CMS2798
Putative exported protein.
 
    0.561
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.