Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CMS2427Putative integral membrane transport protein. (329 aa)    
Predicted Functional Partners:
CMS2425
Putative substrate-binding transport protein.
 
 0.991
CMS2426
Putative integral membrane transport protein.
 0.986
CMS0053
Putative integral membrane binding-protein-dependent transport protein.
 
 0.862
CMS0922
Putative integral membrane transport protein.
 
 0.862
CMS2353
Putative integral membrane transport protein.
 
 
 0.851
CMS2716
Putative integral membrane transport protein.
 
 
 0.843
CMS3038
Putative sugar transport integral membrane protein.
 
 0.841
CMS0373
Putative integral membrane transport protein.
 
 
 0.840
CMS0937
Putative integral membrane transport protein.
 
 0.838
CMS2749
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.822
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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