Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CMS0030 | CMS2473 | CMS0030 | CMS2473 | Conserved hypothetical protein. | Hypothetical protein. | 0.480 |
CMS0883 | CMS2473 | CMS0883 | CMS2473 | Conserved hypothetical protein. | Hypothetical protein. | 0.480 |
CMS2473 | CMS0030 | CMS2473 | CMS0030 | Hypothetical protein. | Conserved hypothetical protein. | 0.480 |
CMS2473 | CMS0883 | CMS2473 | CMS0883 | Hypothetical protein. | Conserved hypothetical protein. | 0.480 |
CMS2473 | CMS2474 | CMS2473 | CMS2474 | Hypothetical protein. | Conserved hypothetical protein. | 0.773 |
CMS2473 | CMS2475 | CMS2473 | CMS2475 | Hypothetical protein. | Putative amino acid export protein. | 0.773 |
CMS2473 | frr | CMS2473 | CMS0774 | Hypothetical protein. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.411 |
CMS2473 | ribA | CMS2473 | CMS2878 | Hypothetical protein. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | 0.457 |
CMS2473 | rpoA | CMS2473 | CMS0316 | Hypothetical protein. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.538 |
CMS2473 | rpoB | CMS2473 | CMS0269 | Hypothetical protein. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.728 |
CMS2473 | rpoC | CMS2473 | CMS0270 | Hypothetical protein. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.827 |
CMS2473 | rpoZ | CMS2473 | CMS2026 | Hypothetical protein. | Putative DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.585 |
CMS2474 | CMS2473 | CMS2474 | CMS2473 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
CMS2474 | CMS2475 | CMS2474 | CMS2475 | Conserved hypothetical protein. | Putative amino acid export protein. | 0.773 |
CMS2475 | CMS2473 | CMS2475 | CMS2473 | Putative amino acid export protein. | Hypothetical protein. | 0.773 |
CMS2475 | CMS2474 | CMS2475 | CMS2474 | Putative amino acid export protein. | Conserved hypothetical protein. | 0.773 |
frr | CMS2473 | CMS0774 | CMS2473 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Hypothetical protein. | 0.411 |
frr | rpoA | CMS0774 | CMS0316 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.672 |
frr | rpoB | CMS0774 | CMS0269 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.767 |
ribA | CMS2473 | CMS2878 | CMS2473 | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | Hypothetical protein. | 0.457 |
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