STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
CMS2661Putative bifunctional kinase/glycosyl transferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (460 aa)    
Predicted Functional Partners:
CMS2660
Putative glycosyl transferase/isomerase.
   
 0.995
CMS2658
Putative glycosyl transferase.
  
 0.986
CMS2659
Putative glycosyl transferase.
 
   
 0.956
CMS2662
Putative short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     0.935
CMS2646
Putative glycosyltransferase.
 
  
 0.837
CMS2670
Putative glycosyl transferase.
 
  
 0.802
CMS2680
Putative sugar synthase (pseudogene); HMMPfam hit to PF00294, Carbohydrate kinase, PfkB,score 5.2e-21.
  
     0.572
CMS2294
Conserved hypothetical protein.
 
     0.550
CMS2656
Hypothetical protein.
       0.480
CMS2657
Hypothetical protein.
       0.480
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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