Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CMS2743Putative lipoprotein. (188 aa)    
Predicted Functional Partners:
CMS1030
Putative integral membrane protein.
  
     0.743
CMS3101
Putative sortase-sorted surface-anchored protein.
  
     0.736
CMS2012
Putative membrane protein.
  
     0.702
CMS0044
Putative integral membrane protein.
  
     0.690
CMS1366
Putative membrane protein.
  
     0.682
CMS2744
Putative transcription factor regulator.
       0.621
CMS1636
Putative DNA-binding protein.
  
     0.583
CMS2754
Putative exported protein.
  
     0.565
CMS2439
Putative integral membrane protein.
  
     0.560
CMS2545
Putative transcriptional regulator.
  
     0.560
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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