Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CMS2759 | CMS2760 | Putative two-component system response regulator. | Putative DNA repair helicase. | 0.561 |
CMS2759 | CMS2761 | Putative two-component system response regulator. | Conserved hypothetical protein. | 0.528 |
CMS2759 | CMS2762 | Putative two-component system response regulator. | Putative membrane protein. | 0.478 |
CMS2760 | CMS2759 | Putative DNA repair helicase. | Putative two-component system response regulator. | 0.561 |
CMS2760 | CMS2761 | Putative DNA repair helicase. | Conserved hypothetical protein. | 0.941 |
CMS2760 | CMS2762 | Putative DNA repair helicase. | Putative membrane protein. | 0.680 |
CMS2760 | CMS2763 | Putative DNA repair helicase. | Putative cold shock protein. | 0.573 |
CMS2760 | CMS2764 | Putative DNA repair helicase. | Hypothetical protein; Hydrophilic Asp-repeat in C-terminus. | 0.572 |
CMS2761 | CMS2759 | Conserved hypothetical protein. | Putative two-component system response regulator. | 0.528 |
CMS2761 | CMS2760 | Conserved hypothetical protein. | Putative DNA repair helicase. | 0.941 |
CMS2761 | CMS2762 | Conserved hypothetical protein. | Putative membrane protein. | 0.748 |
CMS2761 | CMS2763 | Conserved hypothetical protein. | Putative cold shock protein. | 0.615 |
CMS2761 | CMS2764 | Conserved hypothetical protein. | Hypothetical protein; Hydrophilic Asp-repeat in C-terminus. | 0.756 |
CMS2762 | CMS2759 | Putative membrane protein. | Putative two-component system response regulator. | 0.478 |
CMS2762 | CMS2760 | Putative membrane protein. | Putative DNA repair helicase. | 0.680 |
CMS2762 | CMS2761 | Putative membrane protein. | Conserved hypothetical protein. | 0.748 |
CMS2762 | CMS2763 | Putative membrane protein. | Putative cold shock protein. | 0.579 |
CMS2762 | CMS2764 | Putative membrane protein. | Hypothetical protein; Hydrophilic Asp-repeat in C-terminus. | 0.561 |
CMS2763 | CMS2760 | Putative cold shock protein. | Putative DNA repair helicase. | 0.573 |
CMS2763 | CMS2761 | Putative cold shock protein. | Conserved hypothetical protein. | 0.615 |
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