STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMS2947Putative cyclohexanol dehydrogenase. (250 aa)    
Predicted Functional Partners:
CMS0814
Putative short-chain dehydrogenase; Short-chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.682
CMS1138
Putative oxidoreductase.
  
 
 0.639
CMS2946
Conserved hypothetical protein (ATP-binding).
  
    0.526
kasA
3-oxoacyl-[acyl-carrier-protein] synthase I; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.525
fabD
Malonyl coA-acyl carrier protein transacylase.
 
 0.515
CMS2056
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.456
CMS0874
Putative short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.427
CMS2662
Putative short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.419
CMS1683
Putative oxidoreductase.
 
     0.403
fadB
Fatty acid oxidation complex alpha-subunit.
  
 0.402
Your Current Organism:
Clavibacter michiganensis sepedonicus
NCBI taxonomy Id: 31964
Other names: ATCC 33113, Aplanobacter sepedonicum, Bacterium sepedonicum, C. michiganensis subsp. sepedonicus, CCUG 23908, CFBP 2049, CIP 104844, Clavibacter michiganense sepedonicum, Clavibacter michiganensis sepedonicum, Clavibacter michiganensis subsp. sepedonicus, Clavibacter sepedonicus nom. illegit., Corynebacterium michiganense subsp. sepedonicum, Corynebacterium sepedonicum, DSM 20744, ICMP 2535, JCM 9667, LMG 2889, LMG:2889, Mycobacterium sepedonicum, NCPPB 2137, Phytomonas sepedonica, Pseudobacterium sepedonicum
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