STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZC95455.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)    
Predicted Functional Partners:
KZC95456.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.969
KZC96121.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.878
KZC96588.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.865
KZC95659.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.851
KZC96393.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.849
KZC95081.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.839
KZC96127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.827
KZC94174.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.800
KZC95362.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.786
KZC96049.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.610
Your Current Organism:
Clavibacter michiganensis tessellarius
NCBI taxonomy Id: 31965
Other names: ATCC 33566, C. michiganensis subsp. tessellarius, CCUG 38896, CIP 105364, Clavibacter michiganense subsp. tessellarius, Clavibacter michiganense tessellarius, Clavibacter michiganensis subsp. tessellarius, Clavibacter tessellarius nom. illegit., Corynebacterium michiganense subsp. tessellarius, Corynebacterium michigense tessellarius, DSM 20741, ICMP 7221, JCM 9668, LMG 7294, LMG:7294, NCPPB 3664, PDDCC 7221, PDDCC:7221, strain 78181
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