STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZC94849.13-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. FabH family. (337 aa)    
Predicted Functional Partners:
KZC94848.1
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
KZC94851.1
Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.994
KZC95638.1
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
KZC94406.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.936
KZC94934.1
acetyl-/propionyl-CoA carboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.926
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
 
 0.897
KZC93793.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.877
KZC93715.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.857
KZC94690.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.854
KZC94754.1
beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.831
Your Current Organism:
Clavibacter michiganensis tessellarius
NCBI taxonomy Id: 31965
Other names: ATCC 33566, C. michiganensis subsp. tessellarius, CCUG 38896, CIP 105364, Clavibacter michiganense subsp. tessellarius, Clavibacter michiganense tessellarius, Clavibacter michiganensis subsp. tessellarius, Clavibacter tessellarius nom. illegit., Corynebacterium michiganense subsp. tessellarius, Corynebacterium michigense tessellarius, DSM 20741, ICMP 7221, JCM 9668, LMG 7294, LMG:7294, NCPPB 3664, PDDCC 7221, PDDCC:7221, strain 78181
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