STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZC94174.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)    
Predicted Functional Partners:
KZC94173.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
KZC95080.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.840
KZC96050.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.833
KZC96520.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.827
KZC96128.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.823
KZC96392.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.821
AWH51_07930
Histidine kinase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.819
AWH51_03605
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.818
KZC95660.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.810
KZC96122.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.803
Your Current Organism:
Clavibacter michiganensis tessellarius
NCBI taxonomy Id: 31965
Other names: ATCC 33566, C. michiganensis subsp. tessellarius, CCUG 38896, CIP 105364, Clavibacter michiganense subsp. tessellarius, Clavibacter michiganense tessellarius, Clavibacter michiganensis subsp. tessellarius, Clavibacter tessellarius nom. illegit., Corynebacterium michiganense subsp. tessellarius, Corynebacterium michigense tessellarius, DSM 20741, ICMP 7221, JCM 9668, LMG 7294, LMG:7294, NCPPB 3664, PDDCC 7221, PDDCC:7221, strain 78181
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