STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZC94289.1Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)    
Predicted Functional Partners:
KZC95638.1
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
KZC94262.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
pxpA
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.996
KZC94718.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.891
KZC94220.1
1-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
   
 
 0.870
KZC93822.1
Catalyzes the hydrolysis of allophanate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.847
KZC94833.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.823
KZC94835.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.
   
 
  0.823
KZC94934.1
acetyl-/propionyl-CoA carboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.822
KZC95465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.806
Your Current Organism:
Clavibacter michiganensis tessellarius
NCBI taxonomy Id: 31965
Other names: ATCC 33566, C. michiganensis subsp. tessellarius, CCUG 38896, CIP 105364, Clavibacter michiganense subsp. tessellarius, Clavibacter michiganense tessellarius, Clavibacter michiganensis subsp. tessellarius, Clavibacter tessellarius nom. illegit., Corynebacterium michiganense subsp. tessellarius, Corynebacterium michigense tessellarius, DSM 20741, ICMP 7221, JCM 9668, LMG 7294, LMG:7294, NCPPB 3664, PDDCC 7221, PDDCC:7221, strain 78181
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.