Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN65314.1 | KRN67731.1 | IV80_GL000368 | IV80_GL000275 | Hypothetical protein. | Hypothetical protein. | 0.621 |
KRN65908.1 | KRN67731.1 | IV80_GL001751 | IV80_GL000275 | Hypothetical protein; Belongs to the CinA family. | Hypothetical protein. | 0.549 |
KRN65908.1 | nadD | IV80_GL001751 | IV80_GL000288 | Hypothetical protein; Belongs to the CinA family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.970 |
KRN67277.1 | KRN67731.1 | IV80_GL000813 | IV80_GL000275 | Hypothetical protein. | Hypothetical protein. | 0.507 |
KRN67551.1 | KRN67731.1 | IV80_GL000092 | IV80_GL000275 | Hypothetical protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Hypothetical protein. | 0.531 |
KRN67551.1 | folE | IV80_GL000092 | IV80_GL001768 | Hypothetical protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | GTP cyclohydrolase I. | 0.917 |
KRN67730.1 | KRN67731.1 | IV80_GL000274 | IV80_GL000275 | Hypothetical protein. | Hypothetical protein. | 0.882 |
KRN67730.1 | KRN67732.1 | IV80_GL000274 | IV80_GL000276 | Hypothetical protein. | tRNA rRNA methyltransferase ysgA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.600 |
KRN67730.1 | pheT | IV80_GL000274 | IV80_GL000272 | Hypothetical protein. | pheT protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.525 |
KRN67731.1 | KRN65314.1 | IV80_GL000275 | IV80_GL000368 | Hypothetical protein. | Hypothetical protein. | 0.621 |
KRN67731.1 | KRN65908.1 | IV80_GL000275 | IV80_GL001751 | Hypothetical protein. | Hypothetical protein; Belongs to the CinA family. | 0.549 |
KRN67731.1 | KRN67277.1 | IV80_GL000275 | IV80_GL000813 | Hypothetical protein. | Hypothetical protein. | 0.507 |
KRN67731.1 | KRN67551.1 | IV80_GL000275 | IV80_GL000092 | Hypothetical protein. | Hypothetical protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.531 |
KRN67731.1 | KRN67730.1 | IV80_GL000275 | IV80_GL000274 | Hypothetical protein. | Hypothetical protein. | 0.882 |
KRN67731.1 | KRN67732.1 | IV80_GL000275 | IV80_GL000276 | Hypothetical protein. | tRNA rRNA methyltransferase ysgA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.647 |
KRN67731.1 | cca | IV80_GL000275 | IV80_GL000146 | Hypothetical protein. | tRNA adenylyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | 0.535 |
KRN67731.1 | folE | IV80_GL000275 | IV80_GL001768 | Hypothetical protein. | GTP cyclohydrolase I. | 0.501 |
KRN67731.1 | nadD | IV80_GL000275 | IV80_GL000288 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.528 |
KRN67731.1 | pheT | IV80_GL000275 | IV80_GL000272 | Hypothetical protein. | pheT protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.495 |
KRN67732.1 | KRN67730.1 | IV80_GL000276 | IV80_GL000274 | tRNA rRNA methyltransferase ysgA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein. | 0.600 |
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