STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN67796.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
KRN64327.1
HAD superfamily hydrolase.
 
 
  0.872
KRN67653.1
Hypothetical protein.
 
 
  0.861
KRN67795.1
Hypothetical protein.
       0.773
KRN67794.1
Hypothetical protein.
       0.759
KRN67176.1
HAD superfamily hydrolase.
 
     0.715
KRN65209.1
Sugar-phosphatase.
 
 
 
0.628
KRN67336.1
Cof family hydrolase.
 
 
 
0.608
KRN67236.1
HAD superfamily hydrolase.
 
 
 
0.594
KRN67797.1
Glycosyl transferase, group 1.
    
 0.586
KRN66778.1
Phosphotransferase system, mannose fructose-specific component IIA.
    
 0.549
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.