STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN65229.1Cellobiose PTS, EIIC. (425 aa)    
Predicted Functional Partners:
KRN65570.1
Hypothetical protein.
 
 
 0.984
KRN65569.1
Cellobiose-specific PTS system IIB component.
 
 
 0.983
KRN65867.1
PTS family lactose-N,N-diacetylchitobiose-beta-glucoside (lac) porter component IIA.
 
 
 0.969
KRN66108.1
ptsH protein.
    
  0.955
KRN66283.1
PTS system, cellobiose-specific IIA component.
 
 
 0.952
KRN65515.1
PTS family oligomeric beta-glucoside porter component IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 
0.950
KRN65874.1
PTS family lactose-N,N-diacetylchitobiose-beta-glucoside (lac) porter component IIA.
 
 
 0.945
KRN66281.1
Hypothetical protein.
 
 
 0.944
KRN67391.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system eiia, lactose specific.
 
 
 0.941
KRN65228.1
Alpha beta hydrolase superfamily protein.
 
     0.928
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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