STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagHtagH protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system. (362 aa)    
Predicted Functional Partners:
KRN65239.1
ABC-type polysaccharide polyol phosphate export system, permease component.
 
 0.999
KRN65238.1
CDP-glycerol poly(glycerophosphate) glycerophosphotransferase.
 
 
 0.885
KRN67560.1
Glycosyl glycerophosphate transferase.
 
 
 0.842
KRN67559.1
Teichoic acid biosynthesis protein.
 
 
 0.840
KRN66794.1
Ribitolphosphotransferase.
 
 
 0.682
KRN66795.1
tarL protein.
 
 
 0.680
KRN67048.1
Hypothetical protein.
 
 
 0.649
KRN66923.1
Extracellular protein.
 
  
  0.607
KRN66953.1
Lysozyme domain-containing protein.
 
     0.570
KRN66059.1
Hypothetical protein.
 
 
 0.553
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.