STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN64975.1NADH-flavin reductase. (214 aa)    
Predicted Functional Partners:
KRN64976.1
Nucleoside 2-deoxyribosyltransferase family protein.
       0.680
KRN65157.1
Oxidoreductase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
 
    0.593
KRN64974.1
Gluconokinase; Belongs to the FGGY kinase family.
 
     0.575
KRN67182.1
Reductase.
  
    0.541
KRN66761.1
Hypothetical protein.
  
    0.521
KRN67013.1
Hypothetical protein.
   
    0.516
KRN66805.1
Dipeptide tripeptide permease.
   
    0.516
KRN66250.1
Acetylornithine deacetylase succinyl-diaminopimelate desuccinylase-like protein.
   
    0.503
KRN66999.1
Hypothetical protein.
   
    0.501
KRN66901.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.499
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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