STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN67144.15-nucleotidase; Belongs to the 5'-nucleotidase family. (520 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.914
udk
Uridine kinase.
 
 
 0.889
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
  
 
  0.875
KRN65908.1
Hypothetical protein; Belongs to the CinA family.
  
 
  0.875
KRN67306.1
Purine nucleosidase.
  
 
  0.869
KRN66277.1
Purine nucleosidase.
  
 
  0.848
KRN65609.1
HAD superfamily hydrolase.
  
 
 0.664
tdk
Thymidine kinase.
 
  
  0.625
KRN65342.1
Transcriptional regulator; Acts as a magnesium transporter.
    
  0.610
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
 
  0.605
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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