STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN67175.1GntR family transcriptional regulator. (281 aa)    
Predicted Functional Partners:
KRN67174.1
Fructose-1,6-bisphosphate aldolase.
    
  0.777
KRN65043.1
GntR family transcriptional regulator.
  
    0.775
KRN65042.1
GntR family transcriptional regulator.
  
     0.774
KRN65520.1
Transcription regulator.
  
     0.772
KRN65568.1
Hypothetical protein.
  
     0.772
KRN66226.1
GntR family transcriptional regulator.
  
     0.762
KRN67172.1
Hypothetical protein.
 
     0.749
KRN67173.1
Hypothetical protein.
       0.712
KRN67170.1
Sugar kinase.
     
 0.701
KRN67171.1
PTS system galactitol-specific transsporter subunit IIC.
       0.692
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.